The Botryosphaeriaceae: genera and species known from culture
Identifieur interne : 000D08 ( Main/Exploration ); précédent : 000D07; suivant : 000D09The Botryosphaeriaceae: genera and species known from culture
Auteurs : A. J. L. Phillips [Portugal] ; A. Alves [Portugal] ; J. Abdollahzadeh [Iran] ; B. Slippers ; M. J. Wingfield ; J. Z. Groenewald [Pays-Bas] ; P. W. Crous [Pays-Bas]Source :
- Studies in Mycology [ 0166-0616 ] ; 2013.
Abstract
In this paper we give an account of the genera and species in the
Url:
DOI: 10.3114/sim0021
PubMed: 24302790
PubMed Central: 3825232
Affiliations:
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<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">The <italic>Botryosphaeriaceae</italic>: genera and species known from culture</title><author><name sortKey="Phillips, A J L" sort="Phillips, A J L" uniqKey="Phillips A" first="A. J. L." last="Phillips">A. J. L. Phillips</name><affiliation wicri:level="1"><nlm:aff id="A1"> Centro de Recursos Microbiológicos, Departamento de Ciências da Vida, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, 2829-516 Caparica, Portugal</nlm:aff><country xml:lang="fr">Portugal</country><wicri:regionArea> Centro de Recursos Microbiológicos, Departamento de Ciências da Vida, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, 2829-516 Caparica</wicri:regionArea><wicri:noRegion>2829-516 Caparica</wicri:noRegion></affiliation></author><author><name sortKey="Alves, A" sort="Alves, A" uniqKey="Alves A" first="A." last="Alves">A. Alves</name><affiliation wicri:level="1"><nlm:aff id="A2"> Departamento de Biologia, CESAM, Universidade de Aveiro, 3810-193 Aveiro, Portugal</nlm:aff><country xml:lang="fr">Portugal</country><wicri:regionArea> Departamento de Biologia, CESAM, Universidade de Aveiro, 3810-193 Aveiro</wicri:regionArea><wicri:noRegion>3810-193 Aveiro</wicri:noRegion></affiliation></author><author><name sortKey="Abdollahzadeh, J" sort="Abdollahzadeh, J" uniqKey="Abdollahzadeh J" first="J." last="Abdollahzadeh">J. Abdollahzadeh</name><affiliation wicri:level="1"><nlm:aff id="A3"> Plant Protection Department, Agriculture Faculty, University of Kurdistan, P.O. Box 416, Sanandaj, Iran</nlm:aff><country xml:lang="fr">Iran</country><wicri:regionArea> Plant Protection Department, Agriculture Faculty, University of Kurdistan, P.O. Box 416, Sanandaj</wicri:regionArea><wicri:noRegion>Sanandaj</wicri:noRegion></affiliation></author><author><name sortKey="Slippers, B" sort="Slippers, B" uniqKey="Slippers B" first="B." last="Slippers">B. Slippers</name><affiliation><nlm:aff id="A4"> Department of Genetics, Forestry and Agricultural Biotechnology Institute, University of Pretoria, Pretoria, 0002</nlm:aff><wicri:noCountry code="subfield">0002</wicri:noCountry></affiliation></author><author><name sortKey="Wingfield, M J" sort="Wingfield, M J" uniqKey="Wingfield M" first="M. J." last="Wingfield">M. J. Wingfield</name><affiliation><nlm:aff id="A4"> Department of Genetics, Forestry and Agricultural Biotechnology Institute, University of Pretoria, Pretoria, 0002</nlm:aff><wicri:noCountry code="subfield">0002</wicri:noCountry></affiliation></author><author><name sortKey="Groenewald, J Z" sort="Groenewald, J Z" uniqKey="Groenewald J" first="J. Z." last="Groenewald">J. Z. Groenewald</name><affiliation wicri:level="1"><nlm:aff id="A5"> CBS-KNAW Fungal Biodiversity Centre, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands</nlm:aff><country xml:lang="fr">Pays-Bas</country><wicri:regionArea> CBS-KNAW Fungal Biodiversity Centre, Uppsalalaan 8, 3584 CT Utrecht</wicri:regionArea><wicri:noRegion>3584 CT Utrecht</wicri:noRegion></affiliation></author><author><name sortKey="Crous, P W" sort="Crous, P W" uniqKey="Crous P" first="P. W." last="Crous">P. W. Crous</name><affiliation wicri:level="1"><nlm:aff id="A5"> CBS-KNAW Fungal Biodiversity Centre, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands</nlm:aff><country xml:lang="fr">Pays-Bas</country><wicri:regionArea> CBS-KNAW Fungal Biodiversity Centre, Uppsalalaan 8, 3584 CT Utrecht</wicri:regionArea><wicri:noRegion>3584 CT Utrecht</wicri:noRegion></affiliation><affiliation wicri:level="4"><nlm:aff id="A6"> Microbiology, Department of Biology, Utrecht University, Padualaan 8, 3584 CH Utrecht, The Netherlands</nlm:aff><country xml:lang="fr">Pays-Bas</country><wicri:regionArea> Microbiology, Department of Biology, Utrecht University, Padualaan 8, 3584 CH Utrecht</wicri:regionArea><orgName type="university">Université d'Utrecht</orgName><placeName><settlement type="city">Utrecht</settlement><region nuts="2">Utrecht (province)</region></placeName></affiliation><affiliation wicri:level="1"><nlm:aff id="A7"> Wageningen University and Research Centre (WUR), Laboratory of Phytopathology, Droevendaalsesteeg 1, 6708 PB Wageningen, The Netherlands</nlm:aff><country xml:lang="fr">Pays-Bas</country><wicri:regionArea> Wageningen University and Research Centre (WUR), Laboratory of Phytopathology, Droevendaalsesteeg 1, 6708 PB Wageningen</wicri:regionArea><wicri:noRegion>6708 PB Wageningen</wicri:noRegion></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PMC</idno><idno type="pmid">24302790</idno><idno type="pmc">3825232</idno><idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3825232</idno><idno type="RBID">PMC:3825232</idno><idno type="doi">10.3114/sim0021</idno><date when="2013">2013</date><idno type="wicri:Area/Pmc/Corpus">001306</idno><idno type="wicri:Area/Pmc/Curation">001304</idno><idno type="wicri:Area/Pmc/Checkpoint">000974</idno><idno type="wicri:Area/Ncbi/Merge">001525</idno><idno type="wicri:Area/Ncbi/Curation">001525</idno><idno type="wicri:Area/Ncbi/Checkpoint">001525</idno><idno type="wicri:Area/Main/Merge">000D12</idno><idno type="wicri:Area/Main/Curation">000D08</idno><idno type="wicri:Area/Main/Exploration">000D08</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main">The <italic>Botryosphaeriaceae</italic>: genera and species known from culture</title><author><name sortKey="Phillips, A J L" sort="Phillips, A J L" uniqKey="Phillips A" first="A. J. L." last="Phillips">A. J. L. Phillips</name><affiliation wicri:level="1"><nlm:aff id="A1"> Centro de Recursos Microbiológicos, Departamento de Ciências da Vida, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, 2829-516 Caparica, Portugal</nlm:aff><country xml:lang="fr">Portugal</country><wicri:regionArea> Centro de Recursos Microbiológicos, Departamento de Ciências da Vida, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, 2829-516 Caparica</wicri:regionArea><wicri:noRegion>2829-516 Caparica</wicri:noRegion></affiliation></author><author><name sortKey="Alves, A" sort="Alves, A" uniqKey="Alves A" first="A." last="Alves">A. Alves</name><affiliation wicri:level="1"><nlm:aff id="A2"> Departamento de Biologia, CESAM, Universidade de Aveiro, 3810-193 Aveiro, Portugal</nlm:aff><country xml:lang="fr">Portugal</country><wicri:regionArea> Departamento de Biologia, CESAM, Universidade de Aveiro, 3810-193 Aveiro</wicri:regionArea><wicri:noRegion>3810-193 Aveiro</wicri:noRegion></affiliation></author><author><name sortKey="Abdollahzadeh, J" sort="Abdollahzadeh, J" uniqKey="Abdollahzadeh J" first="J." last="Abdollahzadeh">J. Abdollahzadeh</name><affiliation wicri:level="1"><nlm:aff id="A3"> Plant Protection Department, Agriculture Faculty, University of Kurdistan, P.O. Box 416, Sanandaj, Iran</nlm:aff><country xml:lang="fr">Iran</country><wicri:regionArea> Plant Protection Department, Agriculture Faculty, University of Kurdistan, P.O. Box 416, Sanandaj</wicri:regionArea><wicri:noRegion>Sanandaj</wicri:noRegion></affiliation></author><author><name sortKey="Slippers, B" sort="Slippers, B" uniqKey="Slippers B" first="B." last="Slippers">B. Slippers</name><affiliation><nlm:aff id="A4"> Department of Genetics, Forestry and Agricultural Biotechnology Institute, University of Pretoria, Pretoria, 0002</nlm:aff><wicri:noCountry code="subfield">0002</wicri:noCountry></affiliation></author><author><name sortKey="Wingfield, M J" sort="Wingfield, M J" uniqKey="Wingfield M" first="M. J." last="Wingfield">M. J. Wingfield</name><affiliation><nlm:aff id="A4"> Department of Genetics, Forestry and Agricultural Biotechnology Institute, University of Pretoria, Pretoria, 0002</nlm:aff><wicri:noCountry code="subfield">0002</wicri:noCountry></affiliation></author><author><name sortKey="Groenewald, J Z" sort="Groenewald, J Z" uniqKey="Groenewald J" first="J. Z." last="Groenewald">J. Z. Groenewald</name><affiliation wicri:level="1"><nlm:aff id="A5"> CBS-KNAW Fungal Biodiversity Centre, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands</nlm:aff><country xml:lang="fr">Pays-Bas</country><wicri:regionArea> CBS-KNAW Fungal Biodiversity Centre, Uppsalalaan 8, 3584 CT Utrecht</wicri:regionArea><wicri:noRegion>3584 CT Utrecht</wicri:noRegion></affiliation></author><author><name sortKey="Crous, P W" sort="Crous, P W" uniqKey="Crous P" first="P. W." last="Crous">P. W. Crous</name><affiliation wicri:level="1"><nlm:aff id="A5"> CBS-KNAW Fungal Biodiversity Centre, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands</nlm:aff><country xml:lang="fr">Pays-Bas</country><wicri:regionArea> CBS-KNAW Fungal Biodiversity Centre, Uppsalalaan 8, 3584 CT Utrecht</wicri:regionArea><wicri:noRegion>3584 CT Utrecht</wicri:noRegion></affiliation><affiliation wicri:level="4"><nlm:aff id="A6"> Microbiology, Department of Biology, Utrecht University, Padualaan 8, 3584 CH Utrecht, The Netherlands</nlm:aff><country xml:lang="fr">Pays-Bas</country><wicri:regionArea> Microbiology, Department of Biology, Utrecht University, Padualaan 8, 3584 CH Utrecht</wicri:regionArea><orgName type="university">Université d'Utrecht</orgName><placeName><settlement type="city">Utrecht</settlement><region nuts="2">Utrecht (province)</region></placeName></affiliation><affiliation wicri:level="1"><nlm:aff id="A7"> Wageningen University and Research Centre (WUR), Laboratory of Phytopathology, Droevendaalsesteeg 1, 6708 PB Wageningen, The Netherlands</nlm:aff><country xml:lang="fr">Pays-Bas</country><wicri:regionArea> Wageningen University and Research Centre (WUR), Laboratory of Phytopathology, Droevendaalsesteeg 1, 6708 PB Wageningen</wicri:regionArea><wicri:noRegion>6708 PB Wageningen</wicri:noRegion></affiliation></author></analytic><series><title level="j">Studies in Mycology</title><idno type="ISSN">0166-0616</idno><idno type="eISSN">1872-9797</idno><imprint><date when="2013">2013</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p id="P6">In this paper we give an account of the genera and species in the <italic>Botryosphaeriaceae</italic>. We consider morphological characters alone as inadequate to define genera or identify species, given the confusion it has repeatedly introduced in the past, their variation during development, and inevitable overlap as representation grows. Thus it seems likely that all of the older taxa linked to the <italic>Botryosphaeriaceae</italic>, and for which cultures or DNA sequence data are not available, cannot be linked to the species in this family that are known from culture. Such older taxa will have to be disregarded for future use unless they are epitypified. We therefore focus this paper on the 17 genera that can now be recognised phylogenetically, which concentrates on the species that are presently known from culture. Included is a historical overview of the family, the morphological features that define the genera and species and detailed descriptions of the 17 genera and 110 species. Keys to the genera and species are also provided. Phylogenetic relationships of the genera are given in a multi-locus tree based on combined SSU, ITS, LSU, EF1-α and β-tubulin sequences. The morphological descriptions are supplemented by phylogenetic trees (ITS alone or ITS + EF1-α) for the species in each genus.</p><sec id="S1"><title>Taxonomic novelties:</title><p id="P7"><bold>New species</bold> - <bold><italic>Neofusicoccum batangarum</italic></bold> Begoude, Jol. Roux & Slippers. <bold>New combinations</bold> - <italic>Botryosphaeria fabicerciana</italic> (S.F. Chen, D. Pavlic, M.J. Wingf. & X.D. Zhou) A.J.L. Phillips & A. Alves, <italic>Botryosphaeria ramosa</italic> (Pavlic, T.I. Burgess, M.J. Wingf.) A.J.L. Phillips & A. Alves, <italic>Cophinforma atrovirens</italic> (Mehl & Slippers) A. Alves & A.J.L. Phillips, <italic>Cophinforma mamane</italic> (D.E. Gardner) A.J.L. Phillips & A. Alves, <italic>Dothiorella pretoriensis</italic> (Jami, Gryzenh., Slippers & M.J. Wingf.) Abdollahz. & A.J.L. Phillips, <italic>Dothiorella thailandica</italic> (D.Q. Dai., J.K. Liu & K.D. Hyde) Abdollahz., A.J.L. Phillips & A. Alves, <italic>Dothiorella uruguayensis</italic> (C.A. Pérez, Blanchette, Slippers & M.J. Wingf.) Abdollahz. & A.J.L. Phillips, <italic>Lasiodiplodia lignicola</italic> (Ariyawansa, J.K. Liu & K.D. Hyde) A.J.L. Phillips, A. Alves & Abdollahz., <italic>Neoscytalidium hyalinum</italic> (C.K. Campb. & J.L. Mulder) A.J.L. Phillips, Groenewald & Crous, <italic>Sphaeropsis citrigena</italic> (A.J.L. Phillips, P.R. Johnst. & Pennycook) A.J.L. Phillips & A. Alves, <italic>Sphaeropsis eucalypticola</italic> (Doilom, J.K. Liu, & K.D. Hyde) A.J.L. Phillips, <italic>Sphaeropsis porosa</italic> (Van Niekerk & Crous) A.J.L. Phillips & A. Alves. <bold>Epitypification (basionym)</bold> - <italic>Sphaeria sapinea</italic> Fries. <bold>Neotypifications (basionyms)</bold> - <italic>Botryodiplodia theobromae</italic> Pat., <italic>Physalospora agaves</italic> Henn, <italic>Sphaeria atrovirens</italic> var. <italic>visci</italic> Alb. & Schwein.</p></sec></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Abdollahzadeh, J" uniqKey="Abdollahzadeh J">J Abdollahzadeh</name></author><author><name sortKey="Mohammadi Goltapeh, E" uniqKey="Mohammadi Goltapeh E">E Mohammadi Goltapeh</name></author><author><name sortKey="Javadi, A" uniqKey="Javadi A">A Javadi</name></author><author><name sortKey="Shams Bakhsh, M" uniqKey="Shams Bakhsh M">M Shams-Bakhsh</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Abdollahzadeh, J" uniqKey="Abdollahzadeh J">J Abdollahzadeh</name></author><author><name sortKey="Javadi, A" uniqKey="Javadi A">A 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uniqKey="Martin Sanchez P">PM Martín-Sánchez</name></author><author><name sortKey="Perez Jimenez, Rm" uniqKey="Perez Jimenez R">RM Pérez-Jiménez</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Zhang, R" uniqKey="Zhang R">R Zhang</name></author><author><name sortKey="Guo, X" uniqKey="Guo X">X Guo</name></author><author><name sortKey="Sun, G" uniqKey="Sun G">G Sun</name></author><author><name sortKey="Tang, M" uniqKey="Tang M">M Tang</name></author><author><name sortKey="Gleason, Ml" uniqKey="Gleason M">ML Gleason</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Zhou, S" uniqKey="Zhou S">S Zhou</name></author><author><name sortKey="Stanosz, Gr" uniqKey="Stanosz G">GR Stanosz</name></author></analytic></biblStruct></listBibl></div1></back></TEI><affiliations><list><country><li>Iran</li><li>Pays-Bas</li><li>Portugal</li></country><region><li>Utrecht (province)</li></region><settlement><li>Utrecht</li></settlement><orgName><li>Université d'Utrecht</li></orgName></list><tree><noCountry><name sortKey="Slippers, B" sort="Slippers, B" uniqKey="Slippers B" first="B." last="Slippers">B. Slippers</name><name sortKey="Wingfield, M J" sort="Wingfield, M J" uniqKey="Wingfield M" first="M. J." last="Wingfield">M. J. Wingfield</name></noCountry><country name="Portugal"><noRegion><name sortKey="Phillips, A J L" sort="Phillips, A J L" uniqKey="Phillips A" first="A. J. L." last="Phillips">A. J. L. Phillips</name></noRegion><name sortKey="Alves, A" sort="Alves, A" uniqKey="Alves A" first="A." last="Alves">A. Alves</name></country><country name="Iran"><noRegion><name sortKey="Abdollahzadeh, J" sort="Abdollahzadeh, J" uniqKey="Abdollahzadeh J" first="J." last="Abdollahzadeh">J. Abdollahzadeh</name></noRegion></country><country name="Pays-Bas"><noRegion><name sortKey="Groenewald, J Z" sort="Groenewald, J Z" uniqKey="Groenewald J" first="J. Z." last="Groenewald">J. Z. Groenewald</name></noRegion><name sortKey="Crous, P W" sort="Crous, P W" uniqKey="Crous P" first="P. W." last="Crous">P. W. Crous</name><name sortKey="Crous, P W" sort="Crous, P W" uniqKey="Crous P" first="P. W." last="Crous">P. W. Crous</name><name sortKey="Crous, P W" sort="Crous, P W" uniqKey="Crous P" first="P. W." last="Crous">P. W. Crous</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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|texte= The Botryosphaeriaceae: genera and species known from culture
}}
Pour générer des pages wiki
HfdIndexSelect -h $EXPLOR_AREA/Data/Main/Exploration/RBID.i -Sk "pubmed:24302790" \
| HfdSelect -Kh $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd \
| NlmPubMed2Wicri -a OrangerV1
| This area was generated with Dilib version V0.6.25. |  |